Molecular Dx Significance 7/10

Lab Consolidation Enables AI-Driven Genomics and Transformative Diagnostic Platforms

Large-scale consolidation of clinical microbiology laboratories creates the infrastructure needed for efficient deployment of molecular, genome sequencing, and mass spectrometry-based diagnostics alongside AI-driven bioinformatics. Networked laboratories generate well-documented biobanks that accelerate translational research and validation of high-throughput assays. The authors argue that consolidation improves quality across virtually all service dimensions while creating opportunities for novel surveillance and infection prevention strategies.

The original study

Consolidation of Clinical Microbiology Laboratories and Introduction of Transformative Technologies.

Authors
Vandenberg O, Durand G, Hallin M, Diefenbach A, Gant V, Murray P, et al.
Journal
Clinical microbiology reviews
Type
Journal Article, Review
PMID
32102900
Read the original study →

Original abstract

Clinical microbiology is experiencing revolutionary advances in the deployment of molecular, genome sequencing-based, and mass spectrometry-driven detection, identification, and characterization assays. Laboratory automation and the linkage of information systems for big(ger) data management, including artificial intelligence (AI) approaches, also are being introduced. The initial optimism associated with these developments has now entered a more reality-driven phase of reflection on the significant challenges, complexities, and health care benefits posed by these innovations. With this in mind, the ongoing process of clinical laboratory consolidation, covering large geographical regions, represents an opportunity for the efficient and cost-effective introduction of new laboratory technologies and improvements in translational research and development. This will further define and generate the mandatory infrastructure used in validation and implementation of newer high-throughput diagnostic approaches. Effective, structured access to large numbers of well-documented biobanked biological materials from networked laboratories will release countless opportunities for clinical and scientific infectious disease research and will generate positive health care impacts. We describe why consolidation of clinical microbiology laboratories will generate quality benefits for many, if not most, aspects of the services separate institutions already provided individually. We also define the important role of innovative and large-scale diagnostic platforms. Such platforms lend themselves particularly well to computational (AI)-driven genomics and bioinformatics applications. These and other diagnostic innovations will allow for better infectious disease detection, surveillance, and prevention with novel translational research and optimized (diagnostic) product and service development opportunities as key results.