Liquid Biopsy Enters the Phenotypic Era With Single-Cell CTC Profiling
This Clinical Chemistry review describes how advances in single-cell CTC profiling now enable measurement of secreted proteins, surface markers, and intracellular RNAs, moving liquid biopsy beyond genotypic ctDNA analysis toward phenotypic characterization. The authors discuss how combined genotypic and phenotypic information from liquid biopsies is being deployed clinically for therapy selection and resistance monitoring.
The original study
A New Era in Liquid Biopsy: From Genotype to Phenotype.
- Authors
- Kelley SO, Pantel K
- Journal
- Clinical chemistry
- Type
- Journal Article, Research Support, Non-U.S. Gov't, Review
- PMID
- 31811003
Original abstract
BACKGROUND: Liquid biopsy, in which tumor cells and tumor-derived biomolecules are collected from the circulation, is an attractive strategy for the management of cancer that allows the serial monitoring of patients during treatment. The analysis of circulating DNA produced by tumors provides a means to collect genotypic information about the molecular profile of a patient's cancer. Phenotypic information, which may be highly relevant for therapeutic selection, is ideally derived from intact cells, necessitating the analysis of circulating tumor cells (CTCs). CONTENT: Recent advances in profiling CTCs at the single-cell level are providing new ways to collect critical phenotypic information. Analysis of secreted proteins, surface proteins, and intracellular RNAs for CTCs at the single-cell level is now possible and provides a means to quantify molecular markers that are involved with the mechanism of action of the newest therapeutics. We review the latest technological advances in this area along with related breakthroughs in high-purity CTC capture and in vivo profiling approaches, and we also present a perspective on how genotypic and phenotypic information collected via liquid biopsies is being used in the clinic. SUMMARY: Over the past 5 years, the use of liquid biopsy has been adopted in clinical medicine, representing a major paradigm shift in how molecular testing is used in cancer management. The first tests to be used are genotypic measurements of tumor mutations that affect therapeutic effectiveness. Phenotypic information is also clinically relevant and essential for monitoring proteins and RNA sequences that are involved in therapeutic response.